CDS

Accession Number TCMCG017C31622
gbkey CDS
Protein Id OMO58800.1
Location complement(join(9035..9112,9223..9294,9581..9703,10012..10176,10296..10430,10562..10714,10833..10907,11043..11120,11245..11309,11580..11691,11836..11946,12291..12389))
GeneID InterPro:IPR005809
Organism Corchorus olitorius
locus_tag COLO4_34373

Protein

Length 421aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022351.1
Definition Succinyl-CoA synthetase, beta subunit [Corchorus olitorius]
Locus_tag COLO4_34373

EGGNOG-MAPPER Annotation

COG_category C
Description Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
KEGG_Reaction R00432        [VIEW IN KEGG]
R00727        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00014        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K01900        [VIEW IN KEGG]
EC 6.2.1.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.2.1.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00640        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00640        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004774        [VIEW IN EMBL-EBI]
GO:0004775        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005507        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006099        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006104        [VIEW IN EMBL-EBI]
GO:0006105        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006637        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016877        [VIEW IN EMBL-EBI]
GO:0016878        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033865        [VIEW IN EMBL-EBI]
GO:0033875        [VIEW IN EMBL-EBI]
GO:0034032        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035383        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043648        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAGGATTAGTGAACAAACTCGTCTCCCGCTCTCTCTCCGTCGCTGGCAAATGGCAGCAACAGCAGCTCCGCCGTCTCAACATCCACGAATATCAGGGGGCTGAGTTAATGAGCAAATACGGAATTAACGTGCCAAAAGGAGTGGCTGCTGCTTCTATTGATGAAGTTAAACAAGCTGTTAAGTCTGCCTTCGCCAACGAAGATGAGCTGGTGGTTAAAAGTCAAATTTTGGCCGGTGGAAGAGGCTTGGGAACATTCCAAAATGGTTTCAAGGGTGGAGTTCACATCGTCAAGGCTGACCAGGTTGAAGAAATAGCCGGGAAGATGCTTGGGCAGATACTTGTTACTAAACAAACTGGACCCCAAGGCAAAGTTGTTAGCAAGGTTTACCTGTGCCAAAAGTTGTCACTTGTGAATGAGATGTACTTTGCTATCACTCTGGATCGTAAAACTGCTGGTCCGCTTATAATTGCCTGTAAAAAGGGAGGAACCAGCATTGAAGACCTTGCAGAGAAATATCCTGACATGATTATTAAGGTACCTATTGATGTTTTCAAAGGAATTACTGATGAAGATGCTGCGAAGGTTGTGGATGGTTTGGCTCCCAAGGTTGCCGATAGAAATGATTCTATTGAACAAGTGAAGAAACTATATAAGCTTTTCTGTGAATGTGATTGCACATTGTTGGAAATCAATCCTCTTGCTGAGACATCTAGCAACCAATTAGTAGCTGCTGATGCTAAGTTGAACTTTGATGATAATGCTGCTTTCCGTCAGAAGCATATTTTTGCTCTCCGTGATCCATCGCAAGAGGATCCTCGAGAAGTTGCTGCTGCAAAAGCTGATTTGAATTACATTGGCTTAGATGGAGAAATTGGTTGCATGGTTAATGGTGCAGGGTTAGCAATGGCTACAATGGATATAATTAAATTGCATGGAGGAACTCCTGCCAATTTTCTGGATGTAGGTGGGAATGCTTCTGAAAGCCAGGTGGTTGAGGCATTTAAAATTTTGACTTCTGATGACAAAGTGAAAGCAATTTTGGTTAACATATTTGGAGGAATAATGAAATGTGATGTGATTGCAAGTGGCATTGTCAATGCTGCCAAACAGGTTGCTCTAAAAGTTCCAGTTGTGGTTCGTCTCGAAGGTACTAATGTCGACCAAGGGAAGAGAATTTTGAAGGAAAGTGGAATGACACTAATCACAGCAGAAGATTTGGATGATGCTGCGGAGAAAGCAGTTAAAGCATCAAGCAGTTGA
Protein:  
MRGLVNKLVSRSLSVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAAASIDEVKQAVKSAFANEDELVVKSQILAGGRGLGTFQNGFKGGVHIVKADQVEEIAGKMLGQILVTKQTGPQGKVVSKVYLCQKLSLVNEMYFAITLDRKTAGPLIIACKKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGLAPKVADRNDSIEQVKKLYKLFCECDCTLLEINPLAETSSNQLVAADAKLNFDDNAAFRQKHIFALRDPSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASESQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKASSS